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Hyun-Hwan Jeong

Contact Info

Skills

Disclaimer

This resume was made with the R package pagedown.

Last updated on 2019-04-30.

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Hyun-Hwan Jeong

Postdoctoral Associate

I am a postdoctoral associate in the Department of Molecular and Human Genetics at the Baylor College of Medicine and Jan and Dan Duncan Neurological Research Institute. I have received my Ph.D. degree in computer science from Ajou University in August 2015 and started the postdoctoral position in the lab of Dr. Zhandong Liu, and co-mentored by Dr. Huda Zoghbi, since September 2015.

During my Ph.D. studies, I was highly focused on the development of integrative network analysis framework for multiple omics data using information-theoretic measure . I am now focusing on developing a quantification algorithm and computational pipeline construction for NGS data for the neurological disorder.

I am also a developer of SalmonTE and CB2.

Education

Ajou University

Ph.D. in Computer Science and Engineering

Suwon, South Korea

2009 - 2015

Thesis: Integrative network analysis framework for multiple omics data using information-theoretic measure

Ajou University

M.Eng. in Information and Communication Technology

Suwon, South Korea

2007 - 2009

Thesis: Missing SNP genotype imputation by heuristic algorithm

Ajou University

B.S. in Information and Computer Engineering

Suwon, South Korea

2003 - 2007

Research Experience

Postdoctoral Associate

Department of molecular and human genetics, Baylor college of medicine

Houston, Texas

2015 - Present

  • Mentor: Huda Zoghbi and Zhandong Liu

Research assistant

Health Avatar Project, National Core Research Center(NCRC)

Suwon, South Korea

2014 - 2015

  • Developed an multi-omics data intergration software (MINA) integrative omics data analysis using clinical outcome-guided mutual information network.

Teaching Experience

C Programming

Part time Instructor of C programming at Ajou University.

Suwon, South Korea

2014 - 2015

Software problem solving skill training

Instructor of the training course at Ajou University.

Suwon, South Korea

2015

Selected Peer-Reviewed Publications

Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives

Genome Research

N/A

2019

Hyun-Hwan Jeong, Seon Young Kim, Maxime W.C. Rousseaux, Huda Y. Zoghbi, Zhandong Liu

Tau Activates Transposable Elements in Alzheimer’s Disease

Cell Reports

N/A

2018

Caiwei Guo, Hyun-Hwan Jeong, Yi-Chen Hsieh, Hans-Ulrich Klein, David A. Bennett, Philip L. De Jager, Zhandong Liu, Joshua M. Shulman

An ultra-fast and scalable quantification pipeline for transposable elements from next generation sequencing data

Biocomputing 2018

N/A

2018

Hyun-Hwan Jeong, Hari Krishna Yalamanchili, Caiwei Guo, Joshua M. Shulman, Zhandong Liu

CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution

Bioinformatics

N/A

2017

Hyun-Hwan Jeong, Seon Young Kim, Maxime W C Rousseaux, Huda Y Zoghbi, Zhandong Liu

Integrative network analysis for survival-associated gene-gene interactions across multiple genomic profiles in ovarian cancer

Journal of Ovarian Research

N/A

2015

Hyun-hwan Jeong, Sangseob Leem, Kyubum Wee, Kyung-Ah Sohn